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Journal Club

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Academic year 2020/2021

Teaching staff
Prof. Ferdinando Di Cunto
Enzo Medico
Prof. Dario Sangiolo
Year
1st year 2nd year 3rd year
Teaching period
NA
Type
NA
Credits/Recognition
5
Course disciplinary sector (SSD)
BIO/11 - biologia molecolare
BIO/17 - istologia
MED/06 - oncologia medica
Delivery
na
Language
English
Attendance
NA
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Sommario del corso

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Program

Organized by II year students (35th cycle) and mandatory as part of the Characterizing activities of our Program.
The journal clubs will be in form of webinar.



Date: 06.05.2021  h 17-19

Students presenting: Marta Biondo - Giuseppe Rospo 

Title:  "Digitaldlsorter: Deep-Learning on scRNA-Seq to Deconvolute Gene Expression Data"

Referenze paper: Torroja, C., & Sanchez-Cabo, F. (2019). Digitaldlsorter: deep-learning on scRNA-Seq to deconvolute gene expression data. Frontiers in genetics, 10, 978.
Info webex: Here



Date: 13.05.2021 h 17-19
Students presenting: Marco Cortese - Flavia Martino

Title: “Chemotherapy induces dynamic immune responses in breast cancers that impact treatment outcome”

Paper reference: Park, Y. H., Lal, S., Lee, J. E., Choi, Y. L., Wen, J., Ram, S., ... & Kan, Z. (2020). Chemotherapy induces dynamic immune responses in breast cancers that impact treatment outcome. Nature communications, 11(1), 1-14.

Info webex: Here




Date: 20.05.2021 h 17-19
Students presenting: Valentina Russo - Zunaira Munir

Title: "Genome-wide programmable transcriptional memory by CRISPR-based epigenome editing"
Paper reference: Nuñez, J. K., Chen, J., Pommier, G. C., Cogan, J. Z., Replogle, J. M., Adriaens, C., ... & Weissman, J. S. (2021). Genome-wide programmable transcriptional memory by CRISPR-based epigenome editing. Cell.

Info webex: Here



Date: 03.06.2021 h 17-19

Students presenting: Irene Cecchi - Madelaine Audero
Title: Systems analysis of intracellular pH vulnerabilities for cancer therapy
Paper reference: Persi, E., Duran-Frigola, M., Damaghi, M., Roush, W. R., Aloy, P., Cleveland, J. L., ... & Ruppin, E. (2018). Systems analysis of intracellular pH vulnerabilities for cancer therapy. Nature communications, 9(1), 1-11.
Info webex: Here



Date: 10.06.2021 h 17-19
Students presenting: Dario Cardamone - Filippo Valle

Title: Reconstructing cell cycle and disease progression using deep learning
Paper reference: Eulenberg, P., Köhler, N., Blasi, T., Filby, A., Carpenter, A. E., Rees, P., ... & Wolf, F. A. (2017). Reconstructing cell cycle and disease progression using deep learning. Nature communications, 8(1), 1-6.
Info webex: Here 




Date: 17.06.2021 h 17-19

Students presenting: Carina Cojocaru - Vladimir Nosi
Title: CLK1/SRSF5 pathway induces aberrant exon skipping of METTL14 and Cyclin L2 and promotes growth and metastasis of pancreatic cancer
Paper reference: Chen, S., Yang, C., Wang, Z. W., Hu, J. F., Pan, J. J., Liao, C. Y., ... & Wang, Y. D. (2021). CLK1/SRSF5 pathway induces aberrant exon skipping of METTL14 and Cyclin L2 and promotes growth and metastasis of pancreatic cancer. Journal of Hematology & Oncology, 14(1), 1-24. 

Info webex: Here



Date: 02.07.2021 h 17-19
Students presenting: Eirini Chrysanthou - Emir Sehovic
Title: A high-throughput screen of real-time ATP levels in individual cells reveals mechanisms of energy failure
Paper reference: Mendelsohn, B. A., Bennett, N. K., Darch, M. A., Yu, K., Nguyen, M. K., Pucciarelli, D., ... & Nakamura, K. (2018). A high-throughput screen of real-time ATP levels in individual cells reveals mechanisms of energy failure. PLoS biology, 16(8), e2004624.
Info webex: Here

Suggested readings and bibliography



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Class schedule

Content-type: text/html; charset=UTF-8 This module is not available - PhD Programme in Complex Systems for Life Sciences (until 35th cycle) - Università degli Studi di Torino Vai al contenuto principale

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