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Journal Club

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Academic year 2019/2020

Teaching staff
Prof. Ferdinando Di Cunto (Lecturer)
Prof. Alessandra Fiorio Pla (Lecturer)
Year
1st year2nd year3rd year
Type
NA
Credits/Recognition
1
Delivery
na
Language
English
Attendance
NA
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Sommario del corso

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Program

12 - 27 May 2020 (h 16-18)

Organized by II year students (34 cycle) and mandatory as part of the Characterizing activities of our Program. The journal clubs will be in form of webinar Tuesday and Wednesday h 16-18. Here the list of the students presenting. Schedules will be updated each week.

ATTENTION: in order to verify student presence during Journal Club, it will be necessary to write full name in Webex chat after the access. Please note also that the 20th May 2020 Journal Club will be moved 15 minutes up to finish by 17. 


Date: 12.05.2020  h 16-18 

Students presenting: Francesco Mottes - Sofia La vecchia 

Title:  "Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas"

Referenze paper: Way, Gregory P, Sanchez-Vega, Francisco, La, Konnor, Armenia, Joshua, Chatila, Walid K, Luna, Augustin, Sander, Chris, Cherniack, Andrew D, Mina, Marco, Ciriello, Giovanni et al. 2018. Machine Learning Detects Pan-cancer Ras Pathway Activation in The Cancer Genome Atlas. Cell reports, 23(1), 172--180

Info webex: Here



Date: 13.05.2020 h 16-18

Students presenting: Eleonora Ficiarà- Massimo Radin-Giorgia Chinigò

Title: “An Integrated Gene Expression Landscape Profiling Approach to Identify Lung Tumor Endothelial Cell Heterogeneity and Angiogenic Candidates”

Paper reference: Goveia, Jermaine, Rohlenova, Katerina, Taverna, Federico, Treps, Lucas, Conradi, Lena-Christin, Pircher, Andreas, Geldhof, Vincent, de Rooij, Laura PMH, Kalucka, Joanna, Sokol, Liliana et al. 2020. An Integrated Gene Expression Landscape Profiling Approach to Identify Lung Tumor Endothelial Cell Heterogeneity and Angiogenic Candidates. Cancer Cell, 37(1), 21--36

Info webex: Here




Date: 19.05.2020 h 16-18

Students presenting: Serena Peirone- Stefano Carello

Title: A network of epigenomic and transcriptional cooperation encompassing an epigenomic master regulator in cancer
Paper reference: Wilson, Stephen and Filipp, Fabian Volker. 2018. A network of epigenomic and transcriptional cooperation encompassing an epigenomic master regulator in cancer. NPJ systems biology and applications, 4(1), 
1--10

Info webex: Here



Date: 20.05.2020 h 16-18

Students presenting: Isabelle Polignano- Dora Tortarolo

Title: MIBI-TOF: A multiplexed imaging platform relates cellular phenotypes and tissue
Paper reference: Keren, Leeat, Bosse, Marc, Thompson, Steve, Risom, Tyler, Vijayaragavan, Kausalia, McCaffrey, Erin, Marquez, Diana, Angoshtari, Roshan, Greenwald, Noah F, Fienberg, Harris et al. 2019. MIBI-TOF: A multiplexed imaging platform relates cellular phenotypes and tissue. Science Advances, 5(10).

Info webex: Here



Date: 26.05.2020 h 16-18

Students presenting: Camilla Ariano- Chiara Donini

Title: 3D model for CAR-mediated cytotoxicity using patient-derived colorectal cancer organoids. 
Paper reference: Schnalzger, Theresa E, de Groot, Marnix HP, Zhang, Congcong, Mosa, Mohammed H,  Michels, Birgitta E and Röder, Jasmin, Darvishi, Tahmineh, Wels, Winfried S, Farin, Henner F. 2019. 3D model for CAR-mediated cytotoxicity using patient-derived colorectal cancer organoids. The EMBO journal, 38(12).

Info webex: Here 




Date: 27.05.2020 h 16-18

Students presenting: Shoeb Ansari- Hassan Dastsooz

Title: Novel Functions of the Neurodegenerative-Related Gene Tau in Cancers

Paper reference: Gargini, Ricardo, Segura-Collar, Berta and Sanchez-Gomez, Pilar. 2019. Novel functions of the neurodegenerative-related gene Tau in cancer. Frontiers in aging neuroscience, 11(231).  

Info webex: Here

Suggested readings and bibliography



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